Publications

  1. All
  2. Author: Shizuaki Murata

count: 19 　1 - 19

author : Shizuaki Murata

First name Shizuaki
Family name Murata

2019

"Amino Acid Sequence Order in Oligopeptide Dramatically Affects DNA Compaction Mechanism, Morphology of Compact DNA, and Transcription"

Anatoly A. Zinchenko, Hiroyuki Hiramatsu, Hideaki Yamaguchi, Koji Kubo, Shizuaki Murata, Toshio Kanbe, Norio Hazemoto, Kenichi Yoshikawa and Tatsuo Akitaya, Biophys. J, 116, 1-9 (2019)

  detail   publisher   PDF doi: 10.1016/j.bpj.2019.04.010

2014

"Crowding by Anionic Nanoparticles Causes DNA Double-Strand Instability and Compaction"

Anatoly A. Zinchenko, Kanta Tsumoto, Shizuaki Murata and Kenichi Yoshikawa, The Journal of Physical Chemistry　B, 118, 1256-1262 (2014)

  detail   publisher   PDF doi: 10.1021/jp4107712

2010

"Quantum dot probes for observation of single molecule DNA and a synthetic polyelectrolyte higher-order structure"

Ning Chen, Anatoly A. Zinchenko, Yuka Yamazaki, Yuko Yoshikawa, Shizuaki Murata and Kenichi Yoshikawa, Soft Matter, 6, 2834-2841 (2010)

  detail   publisher   PDF doi: 10.1039/C001686A

"Thermo-Switching of the Conformation of Genomic DNA in Solutions of Poly (N-isopropylacrylamide)"

Ning Chen, Anatoly A. Zinchenko, Satoru Kidoaki, Shizuaki Murata and Kenichi Yoshikawa, Langmuir, 26, 2995-2998 (2010)

  detail   publisher   PDF doi: 10.1021/la904375k

"DNA Compaction on Histone Mimics Prepared from Silica Nanoparticles"

Toshio Takenaka, Anatoly A. Zinchenko, Kenichi Yoshikawa and Shizuaki Murata, Chemistry Letters, 39, 72-73 (2010)

  detail   publisher   PDF doi: 10.1246/cl.2010.72

"Roles of Mono- and Divalent Cations in DNA Compaction Induced by Histone-Mimic Nanoparticles"

Toshio Takenaka, Anatoly A. Zinchenko, Kenichi Yoshikawa and Shizuaki Murata, Bulletin of the Chemical Society of Japan, 83, 643-650 (2010)

  detail   publisher   PDF doi: 10.1246/bcsj.20090324

2008

"Photochemical Metallization of DNA"

Anatoly A. Zinchenko, Ning Chen and Shizuaki Murata, Chemistry Letters, 37, 1096-1097 (2008)

  detail   publisher   PDF doi: 10.1246/cl.2008.1096

2007

"Cationic Silica Nanoparticles are Efficiently Transferred into Mammalian Cells"

Li Liu, Toshio Takenaka, Anatoly A. Zinchenko, Ning Chen, Shio Inagaki, Hidetsugu Asada, Tsunao Kishida, Osamu Mazda, Shizuaki Murata and Kenichi Yoshikawa, 281-285 (2007)

  detail   publisher   PDF doi: 10.1109/MHS.2007.4420867

"Weak Interaction Induces an ON/OFF Switch, whereas Strong Interaction Causes Gradual Change: Folding Transition of a Long Duplex DNA Chain by Poly-L-lysine"

Tatsuo Akitaya, Asako Seno, Tonau Nakai, Norio Hazemoto, Shizuaki Murata and Kenichi Yoshikawa, Biomacromolecules, 8, 273-278 (2007)

  detail   publisher   PDF doi: 10.1021/bm060634j

2006

"Molecular design of polyamines and related compounds for controlled DNA folding transition"

Anatoly A. Zinchenko, Ning Chen and Shizuaki Murata, Journal of Synthetic Organic Chemistry, Japan, 64, 1122-1131 (2006)

  detail   PDF

"Na+ more strongly inhibits DNA compaction by spermidine (3+) than K+"

Kumiko Hibino, Yuko Yoshikawa, Shizuaki Murata, Takuya Saito, Anatoly A. Zinchenko and Kenichi Yoshikawa, Chemical Physics Letters, 426, 405-409 (2006)

  detail   publisher   PDF doi: 10.1016/j.cplett.2006.05.120

2005

"Dramatic Change in the Tertiary Structure of Giant DNA without Distortion of the Secondary Structure Caused by Pteridine - Polyamine Conjugates"

Ning Chen, Shizuaki Murata and Kenichi Yoshikawa, Chemistry - A European Journal, 11, 4835-4840 (2005)

  detail   publisher   PDF doi: 10.1002/chem.200500135

"Specific Formation of Beads-on-a-Chain Structures on Giant DNA Using a Designed Polyamine Derivative"

Ning Chen, Shizuaki Murata and Kenichi Yoshikawa, Journal of American Chemical Society, 127, 10910-10916 (2005)

  detail   publisher   PDF doi: 10.1021/ja042509q

"How does DNA compaction favor chiral selectivity with cationic species? Higher selectivity with lower cationic charge"

Anatoly A. Zinchenko, Ning Chen, Shizuaki Murata and Kenichi Yoshikawa, ChemBioChem, 6, 1419-1422 (2005)

  detail   publisher   PDF doi: 10.1002/cbic.200500032

2004

"Stereoisomeric Discrimination in DNA Compaction"

Anatoly A. Zinchenko, Vladimir G. Sergeyev, Victor A. Kabanov, Shizuaki Murata and Kenichi Yoshikawa, Angewandte Chemie International Edition, 43, 2378-2381 (2004)

  detail   publisher   PDF doi: 10.1002/anie.200453774

"DNA Compaction by Divalent Cations: Structural Specificity Revealed by the Potentiality of Designed Quaternary Diammonium Salts"

Anatoly A. Zinchenko, Vladimir G. Sergeyev, Kuniaki Yamabe, Shizuaki Murata and Kenichi Yoshikawa, ChemBioChem, 5, 360-368 (2004)

  detail   publisher   PDF doi: 10.1002/cbic.200300797

2003

"Nonspecificity Induces Chiral Specificity in the Folding Transition of Giant DNA"

Michiko Ito, Akira Sakakura, Naomi Miyazawa, Shizuaki Murata and Kenichi Yoshikawa, Journal of American Chemical Society, 125, 12714-12715 (2003)

  detail   publisher   PDF doi: 10.1021/ja036745x

"Ascorbic acid induces a marked conformational change in long duplex DNA"

Yuko Yoshikawa, Mari Suzuki, Ning Chen, Anatoly A. Zinchenko, Shizuaki Murata, Toshio Kanbe, Tonau Nakai, Hidehiro Oana and Kenichi Yoshikawa, European Journal of Biochemistry, 270, 3101-3106 (2003)

  detail   publisher   PDF doi: 10.1046/j.1432-1033.2003.03699.x

"Controlling the intrachain segregation on a single DNA molecule"

Anatoly A. Zinchenko, Vladimir G. Sergeyev, Shizuaki Murata and Kenichi Yoshikawa, Journal of American Chemical Society, 125, 4414-4415 (2003)

  detail   publisher   PDF doi: 10.1021/ja028804x